STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO1BUnconventional myosin-Ib isoform X1. (1136 aa)    
Predicted Functional Partners:
BAZ1B
Bromodomain adjacent to zinc finger domain protein 1B.
    
  0.573
ACTR2
Actin-related protein 2 isoform X1.
    
 0.539
CALML3
Calmodulin, striated muscle.
    
 0.533
CALM2
Calmodulin.
    
 0.533
CALM1
Calmodulin 1.
    
 0.533
POLR1E
DNA-directed RNA polymerase I subunit RPA49.
    
  0.485
ACTR1A
Alpha-centractin.
    
 0.485
LOC107209164
Actin, cytoplasmic type 5.
   
 0.484
ACTB
Actin, cytoplasmic 1.
   
 0.484
ACTL10
Actin like 10.
   
 0.458
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.