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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLX4IPProtein SLX4IP isoform X1. (450 aa)    
Predicted Functional Partners:
SLX4
Structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12).
    
 
 0.738
ESF1
ESF1 homolog.
      
 0.629
RAD54L2
Helicase ARIP4 isoform X1.
      
 0.548
NARS1
Asparagine--tRNA ligase, cytoplasmic.
    
 
 0.479
TERF2IP
Telomeric repeat-binding factor 2-interacting protein 1.
    
 
 0.477
ATRNL1
Attractin-like protein 1 isoform X1.
      
 0.469
ATRN
Attractin isoform X1.
      
 0.469
EME1
Crossover junction endonuclease EME1 isoform X1.
      
 0.463
MAPRE1
Microtubule-associated protein RP/EB family member 1 isoform X1.
      
 0.447
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.