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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KINDNA/RNA-binding protein KIN17 isoform X1. (390 aa)    
Predicted Functional Partners:
METTL22
Methyltransferase-like protein 22.
    
 0.828
SF3A2
Splicing factor 3a subunit 2.
    
 
 0.702
SF3A3
Splicing factor 3A subunit 3.
    
 
 0.678
RBMX2
RNA-binding motif protein, X-linked 2.
   
   0.604
EEF2KMT
Protein-lysine N-methyltransferase EEF2KMT.
    
 0.569
SF3B3
Splicing factor 3B subunit 3.
    
   0.554
SF3B1
Splicing factor 3B subunit 1 isoform X1.
    
   0.554
PRPF38A
Pre-mRNA-splicing factor 38A.
   
   0.522
BUD13
BUD13 homolog.
   
   0.522
TCTN1
Tectonic-1/3.
    
 0.503
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.