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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC2D1BCoiled-coil and C2 domain-containing protein 1B isoform X1. (870 aa)    
Predicted Functional Partners:
CHMP4B
Charged multivesicular body protein 4b.
    
 0.841
CHMP4C
Charged multivesicular body protein 4c.
    
 0.841
LOC107202897
Charged multivesicular body protein 3.
     
 0.759
IST1
Vacuolar protein sorting-associated protein IST1.
     
 0.754
CHMP6
Charged multivesicular body protein 6.
     
 0.748
CHMP7
Charged multivesicular body protein 7 isoform X1.
     
 0.742
C17orf75
Chromosome 18 C17orf75 homolog.
     
 0.671
PHGDH
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase.
      
 0.651
VPS4B
Vacuolar protein sorting-associated protein 4B.
     
 0.645
VPS4A
Vacuolar protein sorting-associated protein 4A.
     
 0.645
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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