STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107206072SERTA domain-containing protein 2-like. (204 aa)    
Predicted Functional Partners:
XIAP
E3 ubiquitin-protein ligase XIAP isoform X1.
    
   0.757
FAM222A
Protein FAM222A isoform X1.
      
 0.664
CDCA4
Cell division cycle associated 4.
      
 0.625
SEC61G
Protein transport protein SEC61 subunit gamma and related proteins.
      
 0.545
DCTN6
Dynactin subunit 6 isoform X1.
      
 0.538
ZFYVE21
Zinc finger FYVE-type containing 21.
      
 0.537
PINX1
PIN2/TERF1-interacting telomerase inhibitor 1 isoform X1.
      
 0.507
CIAO2B
Mitotic spindle-associated MMXD complex subunit MIP18.
      
 0.476
CAMLG
Calcium signal-modulating cyclophilin ligand.
      
 0.472
LNX1
E3 ubiquitin-protein ligase LNX isoform X1.
      
 0.466
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.