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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIWIL1Piwi-like protein 1. (867 aa)    
Predicted Functional Partners:
TDRD1
Tudor domain-containing protein 1 isoform X1.
   
 0.848
TDRD15
Tudor domain-containing protein 15 isoform X1.
   
 0.764
TDRD6
Tudor domain-containing protein 6 isoform X1.
   
 0.764
TDRD9
Putative ATP-dependent RNA helicase TDRD9 isoform X1.
   
 0.760
RNF17
Tudor domain-containing protein 1/4/6/7.
   
 0.753
TDRD7
Tudor domain-containing protein 7 isoform X1.
   
 0.720
AKAP1
A-kinase anchor protein 1, mitochondrial.
   
 0.662
NANOS3
Nanos C2HC-type zinc finger 3.
   
 
 0.641
MOV10L1
RNA helicase Mov10l1 isoform X1.
   
 0.606
DICER1
Endoribonuclease Dicer.
    
 
 0.597
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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