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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HADHAEnoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase. (770 aa)    
Predicted Functional Partners:
HADHB
Trifunctional enzyme subunit beta, mitochondrial.
 0.999
ACAA2
3-ketoacyl-CoA thiolase, mitochondrial isoform X1.
 
 0.987
ACAA1
3-ketoacyl-CoA thiolase, peroxisomal isoform X1.
 
 0.984
ACAT1
Acetyl-CoA acetyltransferase, mitochondrial.
 
 0.978
ACADS
Short-chain specific acyl-CoA dehydrogenase, mitochondrial.
  
 0.973
ACADL
Long-chain specific acyl-CoA dehydrogenase, mitochondrial.
  
 0.972
ACADSB
Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1.
  
 0.967
ACAT2
Acetyl-CoA acetyltransferase, cytosolic.
 
 0.967
ACADM
Medium-chain specific acyl-CoA dehydrogenase, mitochondrial.
  
 0.967
ACOX1
Peroxisomal acyl-coenzyme A oxidase 1 isoform X1.
  
 0.966
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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