Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPS3528S ribosomal protein S35, mitochondrial isoform X1. (353 aa)    
Predicted Functional Partners:
MRPS5
28S ribosomal protein S5, mitochondrial.
   
 0.998
MRPS22
28S ribosomal protein S22, mitochondrial.
   
 0.997
MRPS11
Mitochondrial ribosomal protein S11.
   
 0.996
DAP3
28S ribosomal protein S29, mitochondrial.
   
 0.996
MRPS9
28S ribosomal protein S9, mitochondrial isoform X1.
   
 0.996
MRPS2
Mitochondrial ribosomal protein S2.
   
 0.994
MRPS15
28S ribosomal protein S15, mitochondrial isoform X1.
   
 0.994
MRPS10
28S ribosomal protein S10, mitochondrial isoform X2.
   
 0.994
MRPS7
28S ribosomal protein S7, mitochondrial.
   
 0.993
MRPS23
Mitochondrial ribosomal protein S23.
   
  0.993
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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