STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COA7Cytochrome c oxidase assembly factor 7. (231 aa)    
Predicted Functional Partners:
MGME1
Mitochondrial genome maintenance exonuclease 1.
      
 0.688
CHCHD4
Mitochondrial intermembrane space import and assembly protein 40.
   
 
 0.650
ATP23
Mitochondrial inner membrane protease ATP23 homolog isoform X1.
      
 0.625
SCAF4
Splicing factor, arginine/serine-rich 15 isoform X1.
    
   0.624
VMA21
Vacuolar ATPase assembly integral membrane protein VMA21.
    
   0.617
ERLEC1
Endoplasmic reticulum lectin 1.
   
 0.565
MRPS22
28S ribosomal protein S22, mitochondrial.
   
  
 0.556
C1D
Nuclear nucleic acid-binding protein C1D.
    
   0.551
MPHOSPH6
M-phase phosphoprotein 6, animal type.
    
   0.551
DERL1
Derlin-1 isoform X1.
   
 0.547
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.