close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP54Nuclear pore complex protein Nup54. (560 aa)    
Predicted Functional Partners:
RANBP2
E3 SUMO-protein ligase RanBP2 isoform X1.
   
 0.999
NUP62CL
Nucleoporin 62 C-terminal like.
   
 0.998
NUP93
Nuclear pore complex protein Nup93 isoform X1.
   
 0.997
NUP205
Nuclear pore complex protein Nup205.
   
 0.997
NUP155
Nuclear pore complex protein Nup155 isoform X1.
   
 0.997
NUP98
Nuclear pore complex protein Nup98-Nup96-like.
   
0.995
NUP58
Nucleoporin p58/p45 isoform X1.
   
 0.990
NUP133
Nuclear pore complex protein Nup133 isoform X1.
   
 0.988
NUP107
Nuclear pore complex protein Nup107.
   
 0.987
NUP85
Nucleoporin 85.
   
 0.986
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.