Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMJP00000001475annotation not available (243 aa)    
Predicted Functional Partners:
MSRA
Mitochondrial peptide methionine sulfoxide reductase isoform X1.
  
 0.725
MAP3K5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.678
DENND10
Protein FAM45A isoform X1.
  
 0.633
PRDX3
Peroxiredoxin 3.
  
 0.633
PRDX4
Peroxiredoxin-4 isoform X1.
  
 0.633
PRDX1
Peroxiredoxin 1.
  
 0.633
TRIM23
E3 ubiquitin-protein ligase TRIM23 isoform X1.
   
 0.606
TXNRD1
Thioredoxin reductase 1, cytoplasmic.
  
 0.600
TXNRD3
Thioredoxin reductase (NADPH).
  
 0.600
TXNRD2
Thioredoxin reductase 2, mitochondrial isoform X1.
  
 0.600
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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