Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMJP00000001481annotation not available (819 aa)    
Predicted Functional Partners:
MYO15A
Unconventional myosin-XV.
 
      0.864
WHRN
Whirlin isoform X1.
    
 0.704
USH1C
Harmonin isoform X1.
   
 0.661
USH1G
Usher syndrome type-1G protein isoform X1.
   
 0.636
ANKS4B
Ankyrin repeat and SAM domain-containing protein 4B.
   
 0.607
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.513
RDX
Radixin.
    
 0.509
NEO1
Neogenin isoform X1.
    
  0.493
ESPN
Espin.
   
 0.489
ENSPMJP00000002279
annotation not available
     
 0.476
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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