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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCN3H(+)/Cl(-) exchange transporter 3 isoform X1. (866 aa)    
Predicted Functional Partners:
OSTM1
Osteopetrosis-associated transmembrane protein 1 (chloride channel 7 beta subunit).
    
 0.680
EXOSC10
Exosome complex exonuclease RRP6.
     
 0.650
LOC107198835
Fas-binding factor 1-like isoform X1.
      
 0.620
NMNAT3
Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 isoform X1.
      
 0.534
GPR162
Probable G-protein coupled receptor 162.
      
 0.533
ITSN2
Intersectin-2 isoform X1.
      
 0.533
PIGK
GPI-anchor transamidase isoform X1.
      
 0.533
RNF123
Kip1 ubiquitination-promoting complex protein 1.
      
 0.523
SSRP1
Structure-specific recognition protein 1.
      
 0.508
BSND
Barttin (chloride channel Ka/b beta subunit).
   
 
 0.478
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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