STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HAPLN4Hyaluronan and proteoglycan link protein 4. (446 aa)    
Predicted Functional Partners:
TM6SF2
Transmembrane 6 superfamily member 2.
      
 0.800
CENPM
Centromere protein M.
      
 0.773
TM6SF1
Transmembrane 6 superfamily member 1 isoform X1.
      
 0.771
KCNS2
Potassium voltage-gated channel delayed-rectifier subfamily S member 2.
   
  
 0.648
CCDC183
Coiled-coil domain-containing protein 183 isoform X1.
      
 0.635
TPRG1L
Tumor protein p63-regulated gene 1-like protein.
      
 0.566
SSTR4
Somatostatin receptor 4.
      
 0.535
SSTR1
Somatostatin receptor type 1.
      
 0.535
PHOX2B
Paired mesoderm homeobox protein 2B.
      
 0.510
PRELP
Proline arginine-rich end leucine-rich repeat protein.
      
 0.476
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.