Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBX3Chromobox protein homolog 3 isoform X1. (190 aa)    
Predicted Functional Partners:
PCGF6
Polycomb group RING finger protein 6 isoform X1.
    
 0.982
L3MBTL2
Lethal(3)malignant brain tumor-like protein 2 isoform X1.
    
 0.979
E2F6
Transcription factor E2F6 isoform X1.
   
 0.974
EHMT1
Histone-lysine N-methyltransferase EHMT1 isoform X1.
    
 0.946
ADNP
Activity-dependent neuroprotector homeobox protein isoform X2.
    
 
 0.935
CHAF1A
Chromatin assembly factor 1 subunit A isoform X2.
   
 
 0.921
ADNP2
ADNP homeobox protein 2.
    
 
 0.919
CBX1
Chromobox protein homolog 1.
   
 
 0.914
TRIM66
Tripartite motif-containing protein 66 isoform X1.
    
 0.912
SUV39H2
Suppressor of variegation 3-9 homolog 2.
   
 0.910
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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