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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPON1Spondin-1. (802 aa)    
Predicted Functional Partners:
B3GLCT
UDP-glucose:O-linked fucose beta-1,3-glucosyltransferase.
     
 0.753
APP
Amyloid beta A4 protein isoform X1.
   
 
 0.688
THSD4
Thrombospondin type-1 domain-containing protein 4 isoform X1.
     
0.552
ENSPMJP00000002991
annotation not available
     
 0.487
ENSPMJP00000004614
annotation not available
     
 0.487
ENSPMJP00000007355
annotation not available
     
 0.487
POFUT2
GDP-fucose protein O-fucosyltransferase 2.
     
 0.487
CYP26B1
Cytochrome P450 family 26 subfamily B.
      
 0.483
ANLN
Actin-binding protein anillin isoform X1.
      
 0.470
GALNT3
Polypeptide N-acetylgalactosaminyltransferase 3.
      
 0.459
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.