close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFXANKRegulatory factor X-associated ankyrin-containing protein. (594 aa)    
Predicted Functional Partners:
RFX7
DNA-binding protein RFX7 isoform X1.
    
 
 0.888
RFXAP
Regulatory factor X-associated protein.
    
 
 0.821
CIITA
MHC class II transactivator.
   
 
 0.728
CREB1
Cyclic AMP-responsive element-binding protein 1.
      
 0.533
NLRC5
NLR family CARD domain containing 5.
   
 
 0.524
MEF2B
MADS-box transcription enhancer factor 2B.
      
 0.520
NFYC
Nuclear transcription factor Y subunit gamma isoform X1.
    
 
 0.481
NR2C2AP
Nuclear receptor 2C2-associated protein.
    
 0.474
CAMKMT
Calmodulin-lysine N-methyltransferase isoform X1.
    
 
 0.474
TMEM69
Transmembrane protein 69.
      
 0.463
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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