STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX10Sorting nexin-10 isoform X1. (225 aa)    
Predicted Functional Partners:
VPS35
Vacuolar protein sorting-associated protein 35.
   
 0.851
VPS29
Vacuolar protein sorting-associated protein 29 isoform X1.
   
 0.798
VPS26B
Vacuolar protein sorting-associated protein 26B.
    
 0.727
VPS26A
Vacuolar protein sorting-associated protein 26A.
    
 0.727
GARS1
Glycyl-tRNA synthetase.
      
 0.686
WLS
Protein wntless homolog.
    
 0.625
PLEKHM1
Pleckstrin homology domain-containing family M member 1 isoform X1.
      
 0.599
HS1BP3
HCLS1-binding protein 3.
      
 0.568
OSTM1
Osteopetrosis-associated transmembrane protein 1 (chloride channel 7 beta subunit).
      
 0.542
CLCN7
H(+)/Cl(-) exchange transporter 7.
      
 0.505
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.