STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107213308Rho GTPase-activating protein 39-like isoform X1. (1064 aa)    
Predicted Functional Partners:
ASPHD2
Aspartate beta-hydroxylase domain-containing protein 2.
      
 0.545
TMEM35A
Transmembrane protein 35.
     
 0.535
IPO5
Importin-5.
    
 
 0.498
CDC42
Cell division control protein 42 homolog isoform X1.
    
 0.452
RPL3
Large subunit ribosomal protein L3e.
    
 0.445
ELMOD3
ELMO domain containing 3.
      
 0.445
RPL3L
Large subunit ribosomal protein L3e.
    
 0.445
VPS53
Vacuolar protein sorting-associated protein 53 homolog isoform X1.
      
 0.434
LOC107203976
Connector enhancer of kinase suppressor of ras 2-like isoform X1.
   
 
 0.422
CNKSR2
Connector enhancer of kinase suppressor of ras 2 isoform X1.
   
 
 0.422
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.