STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB25Zinc finger and BTB domain-containing protein 25 isoform X1. (457 aa)    
Predicted Functional Partners:
ELP6
Elongator complex protein 6.
    
   0.872
GMCL1
BTB/POZ domain-containing protein 13 (germ cell-less protein-like 1).
      
 0.683
KPNA1
Importin subunit alpha-5.
    
 0.657
CARNMT1
Carnosine N-methyltransferase isoform X2.
    
   0.638
NSMCE4A
Non-structural maintenance of chromosomes element 4 homolog A.
    
 
 0.629
AMDHD2-2
N-acetylglucosamine-6-phosphate deacetylase isoform X1.
      
 0.566
NSMCE2
E3 SUMO-protein ligase NSE2 isoform X1.
    
 
 0.549
MLH1
DNA mismatch repair protein MLH1.
      
 0.539
GATAD2B
GATA zinc finger domain containing 2B.
    
 0.531
ARHGAP12
Rho GTPase-activating protein 12 isoform X2.
      
 0.524
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.