STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC125Coiled-coil domain-containing protein 125 isoform X1. (503 aa)    
Predicted Functional Partners:
CCDC149
Coiled-coil domain containing 149.
      
 0.577
CCDC92
Coiled-coil domain-containing protein 92.
      
 0.533
POLR2B
DNA-directed RNA polymerase II subunit RPB2.
      
 0.533
TACC1
Transforming acidic coiled-coil-containing protein 1 isoform X1.
      
 0.532
BICDL1
BICD family like cargo adaptor 1.
      
 0.468
RASL11B
Ras-like protein family member 11B.
      
 0.457
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.