close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXA5Homeobox protein HoxA/B/C5. (270 aa)    
Predicted Functional Partners:
FOXC1
Forkhead box C1.
    
 0.700
NFATC2
Nuclear factor of activated T-cells, cytoplasmic 2.
      
 0.690
HOXA3
Homeobox protein HoxA/B/D3.
   
  
0.628
FOXC2
Forkhead box protein C2.
    
 0.486
SLC6A2
Solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2.
   
  
 0.474
CLPTM1L
Cleft lip and palate transmembrane protein 1-like protein.
      
 0.449
LPCAT1
Lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase.
      
 0.449
HOXB5
Homeobox protein HoxA/B/C5.
  
   
0.445
HOXB7
Homeobox protein HoxA/B7.
   
  
0.401
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.