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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RALGAPBRal GTPase-activating protein subunit beta isoform X1. (1526 aa)    
Predicted Functional Partners:
RALGAPA2
Ral GTPase activating protein catalytic alpha subunit 2.
   
0.715
RALGAPA1
Ral GTPase-activating protein subunit alpha-1 isoform X1.
   
 0.715
TMEM131
Transmembrane protein 131.
   
  
 0.584
DHX40
Probable ATP-dependent RNA helicase DHX40 isoform X1.
   
 
 0.534
ENSPMJP00000003356
annotation not available
      
 0.533
ACOT8
Acyl-coenzyme A thioesterase 8.
      
 0.533
ZMAT2
U4/U6.U5 tri-snRNP component SNU23.
      
 0.533
SLC25A13
Solute carrier family 25 (mitochondrial aspartate/glutamate transporter), member 12/13.
      
 0.527
NAA20
N(alpha)-acetyltransferase 20, NatB catalytic subunit.
      
 0.520
MED21
Mediator of RNA polymerase II transcription subunit 21.
      
 0.509
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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