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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT10BTRNA (guanine9-N1)-methyltransferase. (261 aa)    
Predicted Functional Partners:
HSD17B10
3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase.
    
 0.789
WDR4
WD repeat domain 4.
   
 
 0.681
TRMT5
TRNA (guanine(37)-N1)-methyltransferase isoform X2.
   
  
 0.630
FTSJ3
AdoMet-dependent rRNA methyltransferase SPB1.
   
  
 0.619
PUS1
TRNA pseudouridine synthase A, mitochondrial isoform X1.
   
 
 0.586
TRIT1
TRNA dimethylallyltransferase, mitochondrial.
   
  
 0.582
PUS3
TRNA pseudouridine(38/39) synthase.
   
 
 0.578
TRMT6
TRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X1.
   
  
 0.572
MRPS15
28S ribosomal protein S15, mitochondrial isoform X1.
   
   0.570
FTSJ1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase.
   
  
 0.568
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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