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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPGD15-hydroxyprostaglandin dehydrogenase [NAD(+)]. (266 aa)    
Predicted Functional Partners:
ZADH2
Zinc-binding alcohol dehydrogenase domain-containing protein 2 isoform X1.
 
 0.668
PTGES3
Prostaglandin E synthase 3.
      
 0.530
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial.
  
 0.509
RSPO4
R-spondin 4.
   
 
 0.481
UBR4
E3 ubiquitin-protein ligase UBR4.
      
 0.468
PTGR1
Prostaglandin reductase 1.
   
 
 0.463
LOC107203959
Ferredoxin-2, mitochondrial.
   
 0.458
FDX1
Ferredoxin-1, mitochondrial.
   
 0.458
MCAT
malonyl-CoA-acyl carrier protein transacylase.
  
 
 0.457
LOC107205327
Aldehyde dehydrogenase family 3 member B1-like.
  
 0.436
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.