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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM126ATransmembrane protein 126A-like. (206 aa)    
Predicted Functional Partners:
NDUFAF1
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1.
   
 
 0.723
ACAD9
Acyl-CoA dehydrogenase family member 9, mitochondrial.
     
 0.680
ENSPMJP00000008492
annotation not available
      
 0.664
TMEM41A
Transmembrane protein 41A isoform X1.
      
 0.635
LOC107211659
Acyl-CoA dehydrogenase family member 11-like.
     
 0.611
METTL27
Methyltransferase like 27.
   
 
 0.544
RTN4IP1
Reticulon-4-interacting protein 1, mitochondrial.
   
  
 0.538
DHRS7
Dehydrogenase/reductase SDR family member 7 isoform X1.
      
 0.533
MARCHF5
E3 ubiquitin-protein ligase MARCH5.
      
 0.532
TMUB1
Transmembrane and ubiquitin-like domain-containing protein 1.
      
 0.530
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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