close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC7Zinc finger CCHC domain-containing protein 7. (583 aa)    
Predicted Functional Partners:
MTREX
Superkiller viralicidic activity 2-like 2 isoform X1.
   
 
 0.942
TENT4B
Non-canonical poly(A) RNA polymerase PAPD5/7.
   
 
 0.866
TENT4A
Non-canonical poly(A) RNA polymerase PAPD7 isoform X1.
   
 
 0.866
EXOSC10
Exosome complex exonuclease RRP6.
   
 
 0.684
PAPOLG
poly(A) polymerase gamma.
      
 0.676
EXOSC9
Exosome complex component RRP45.
   
  
 0.638
RBM7
RNA-binding protein 7.
   
  
 0.613
EXOSC1
Exosome complex component CSL4 isoform X1.
   
  
 0.600
EXOSC8
LOW QUALITY PROTEIN: exosome complex component RRP43.
   
 
 0.589
C1D
Nuclear nucleic acid-binding protein C1D.
   
 
 0.575
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.