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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPM6ANeuronal membrane glycoprotein M6-a. (278 aa)    
Predicted Functional Partners:
SCN3B
Voltage-gated sodium channel type III beta.
   
  
 0.700
SNCA
Alpha-synuclein.
   
 
 0.698
GABRE
Gamma-aminobutyric acid receptor subunit epsilon.
   
  
 0.696
KCNC1
Potassium voltage-gated channel Shaw-related subfamily C member 1.
   
  
 0.687
MBP
Myelin basic protein isoform X1.
   
 
 0.550
UPK1B
Uroplakin-1b.
   
  
 0.485
CLCN3
H(+)/Cl(-) exchange transporter 3 isoform X1.
   
  
 0.460
ANKRD10
Ankyrin repeat domain-containing protein 10.
      
 0.459
LOC107208889
Schwannomin-interacting protein 1 isoform X1.
   
  
 0.418
TSPAN7
Tetraspanin-7.
   
  
 0.406
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.