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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIX1LLIX1-like protein. (337 aa)    
Predicted Functional Partners:
FAT3
Protocadherin Fat 3 isoform X1.
   
 0.725
CWC25
Pre-mRNA-splicing factor CWC25 homolog.
   
    0.636
C23H1orf109
Uncharacterized protein C1orf109 homolog.
   
    0.636
RUBCNL
Uncharacterized protein KIAA0226-like homolog isoform X1.
   
    0.634
MOCS3
Adenylyltransferase and sulfurtransferase MOCS3.
   
    0.591
ACOT11
acyl-CoA thioesterase 11.
   
    0.586
ACOT12
Acyl-coenzyme A thioesterase 12 isoform X1.
   
    0.586
C5orf22
UPF0489 protein C5orf22 homolog.
   
 0.555
FAT1
Protocadherin Fat 1 isoform X1.
   
 0.524
FAT2
Protocadherin Fat 1/2/3.
   
 0.524
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.