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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYHPhytanoyl-CoA dioxygenase, peroxisomal. (341 aa)    
Predicted Functional Partners:
PEX7
Peroxisomal biogenesis factor 7.
    
 0.835
PEX5
Peroxisomal biogenesis factor 5 isoform X1.
    
 0.726
ACAA1
3-ketoacyl-CoA thiolase, peroxisomal isoform X1.
   
 
 0.721
AASDH
Acyl-CoA synthetase family member 4 isoform X1.
  
  
 0.711
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
      
 0.690
PHYHIP
Phytanoyl-CoA hydroxylase-interacting protein.
    
 
 0.680
PEX13
Peroxisome biogenesis factor 13.
     
 0.674
PEX10
Peroxisome biogenesis factor 10 isoform X1.
   
 
 0.664
PEX14
Peroxisomal membrane protein PEX14.
    
 0.655
PEX12
Peroxisome assembly protein 12.
     
 0.639
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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