STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHYHPhytanoyl-CoA dioxygenase, peroxisomal. (341 aa)    
Predicted Functional Partners:
PEX7
Peroxisomal biogenesis factor 7.
    
 0.926
PEX5
Peroxisomal biogenesis factor 5 isoform X1.
     
 0.799
TYSND1
Peroxisomal leader peptide-processing protease.
     
 0.795
AGPS
Alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X3.
   
 0.766
PEX14
Peroxisomal membrane protein PEX14.
     
 0.751
PEX12
Peroxisome assembly protein 12.
     
 0.714
PHYHIP
Phytanoyl-CoA hydroxylase-interacting protein.
    
 
 0.700
WDR6
WD repeat-containing protein 6.
      
 0.686
ACADL
Long-chain specific acyl-CoA dehydrogenase, mitochondrial.
   
  
 0.683
TATDN3
Putative deoxyribonuclease TATDN3 isoform X1.
      
 0.658
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.