Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SV2AMFS transporter, VNT family, synaptic vesicle glycoprotein 2. (727 aa)    
Predicted Functional Partners:
SV2B
MFS transporter, VNT family, synaptic vesicle glycoprotein 2.
  
  
 
0.901
SV2C
MFS transporter, VNT family, synaptic vesicle glycoprotein 2.
  
  
 
0.901
LAMC2
Laminin subunit gamma-2 isoform X1.
     
 0.789
LAMC3
Laminin subunit gamma-3 isoform X1.
     
 0.710
LAMC1
Laminin subunit gamma-1 isoform X1.
     
 0.710
LAMA5
Laminin subunit alpha 5.
     
 0.698
LAMA3
Laminin subunit alpha 3.
     
 0.698
LOC107210119
Laminin subunit beta-2-like.
     
 0.689
LAMA4
Laminin subunit alpha-4 isoform X1.
     
 0.689
LOC107210502
Laminin subunit beta-2-like isoform X1.
     
 0.683
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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