STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTMR11Myotubularin-related protein 11 isoform X1. (727 aa)    
Predicted Functional Partners:
VPS45
Vacuolar protein sorting-associated protein 45 isoform X1.
      
 0.590
CIART
Circadian associated repressor of transcription.
      
 0.542
SEMA6C
Semaphorin-6C.
  
   
 0.522
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
   0.468
TPST1
Protein-tyrosine sulfotransferase 1 isoform X1.
      
 0.446
OTUD7B
OTU domain-containing protein 7B.
    
 
 0.435
NT5DC1
5'-nucleotidase domain-containing protein 1.
      
 0.435
AJAP1
Adherens junctions associated protein 1.
      
 0.434
ARL14
ADP-ribosylation factor-like protein 14.
    
 
 0.424
INPP5K
Inositol polyphosphate 5-phosphatase K isoform X4.
     
 0.420
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.