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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SENP5Sentrin-specific protease 5. (660 aa)    
Predicted Functional Partners:
SUMO1
Small ubiquitin-related modifier 1.
   
 0.851
TEX10
Testis-expressed sequence 10 protein isoform X1.
    
 0.845
LAS1L
Ribosomal biogenesis protein LAS1L isoform X1.
   
 0.822
WDR18
Pre-rRNA-processing protein IPI3.
    
 0.814
SUMO2
Small ubiquitin-related modifier 2.
   
 0.761
LOC107208897
Small ubiquitin-related modifier 3-like.
   
 0.761
SENP6
Sentrin-specific protease 6 isoform X1.
    
0.737
CREBZF
CREB/ATF bZIP transcription factor.
   
 0.711
NOL9
Polynucleotide 5'-hydroxyl-kinase NOL9 isoform X1.
   
 0.705
RANGAP1
Ran GTPase-activating protein 1 isoform X1.
    
 
 0.640
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.