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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107215664Keratin, type II cytoskeletal 5-like. (508 aa)    
Predicted Functional Partners:
UNC79
Protein unc-79 homolog isoform X1.
    
 0.759
ACTR5
LOW QUALITY PROTEIN: actin-related protein 5.
    
 0.564
NFRKB
Nuclear factor related to kappa-B-binding protein isoform X1.
    
 0.552
RANBP2
E3 SUMO-protein ligase RanBP2 isoform X1.
    
 0.520
INO80D
INO80 complex subunit D.
    
 0.520
INO80
DNA helicase INO80.
    
 0.517
INO80C
INO80 complex subunit C.
    
 0.516
ACTR8
Actin-related protein 8.
    
 0.512
RUVBL1
RuvB-like protein 1 (pontin 52).
    
  0.490
YY1
YY1 transcription factor.
    
  0.483
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.