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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FTOAlpha-ketoglutarate-dependent dioxygenase FTO isoform X1. (525 aa)    
Predicted Functional Partners:
ALKBH5
MRNA N6-methyladenine demethylase.
     
 0.874
ALKBH1
Alkylated DNA repair protein alkB homolog 1.
     
 0.820
ALKBH8
Alkylated DNA repair protein alkB homolog 8 isoform X1.
     
 0.778
SSX2IP
Afadin- and alpha-actinin-binding protein isoform X1.
     
 0.682
METTL14
MRNA m6A methyltransferase non-catalytic subunit.
      
 0.660
CREB1
Cyclic AMP-responsive element-binding protein 1.
      
 0.633
WTAP
Pre-mRNA-splicing regulator WTAP.
      
 0.632
YTHDF1
YTH domain-containing family protein 1 isoform X1.
      
 0.545
LOC107212695
Argininosuccinate lyase.
      
 0.538
MMS19
MMS19 nucleotide excision repair protein homolog isoform X1.
      
 0.533
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.