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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMJP00000002263annotation not available (92 aa)    
Predicted Functional Partners:
CDKN1B
Cyclin-dependent kinase inhibitor 1B.
   
 0.650
CDKN1A
Cyclin-dependent kinase inhibitor 1A.
   
 0.650
RBL1
Retinoblastoma-like protein 1 isoform X1.
    
 0.611
RBL2
Retinoblastoma-like protein 2 isoform X1.
    
 0.611
RB1
Retinoblastoma-associated protein isoform X1.
    
 0.611
SKP1
S-phase kinase-associated protein 1.
    
 0.610
SKP2
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2).
   
 0.590
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
    
  0.581
ENSPMJP00000002373
Claudin-22-like.
   
 0.535
CDK4
Cyclin-dependent kinase 4-like.
   
 0.535
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.