STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMP3Lysosome-associated membrane glycoprotein 3. (428 aa)    
Predicted Functional Partners:
LAMP2
Lysosome-associated membrane glycoprotein 2 isoform X1.
     
0.901
LAMP1
Lysosome-associated membrane glycoprotein 1.
     
 
0.900
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 
 0.521
SEC13
Protein transport protein SEC13.
    
 
 0.514
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 
 0.513
NPRL3
Nitrogen permease regulator 3-like protein isoform X1.
    
 
 0.483
WDR24
WD repeat-containing protein 24.
    
 
 0.477
WDR59
WD repeat-containing protein 59 isoform X1.
    
 
 0.468
DEPDC5
DEP domain-containing protein 5 isoform X1.
    
 
 0.465
MIOS
WD repeat-containing protein mio isoform X1.
    
   0.461
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.