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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A6Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 6. (467 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.557
SLC35C2
Solute carrier family 35 member C2.
   
  
 0.544
RRAGB
Ras-related GTP-binding protein A/B.
   
 0.501
RAB3GAP1
Rab3 GTPase-activating protein catalytic subunit isoform X1.
   
    0.495
NOCT
Nocturnin.
   
    0.493
LAMTOR1
Ragulator complex protein LAMTOR1 isoform X1.
    
 0.469
LAMTOR5
Ragulator complex protein LAMTOR5.
    
 0.461
ENSPMJP00000019283
annotation not available
   
 0.456
PREPL
Prolyl endopeptidase-like isoform X1.
      
 0.451
SLC41A2
Solute carrier family 41 member 2.
      
 0.430
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.