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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT5TRNA (guanine(37)-N1)-methyltransferase isoform X2. (597 aa)    
Predicted Functional Partners:
TRMT112
tRNA methyltransferase subunit 11-2.
   
 
 0.770
TYW3
tRNA-yW synthesizing protein 3 homolog.
  
 
 0.753
TYW1
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase.
   
 
 0.718
TRIT1
TRNA dimethylallyltransferase, mitochondrial.
   
  
 0.704
DUS2
TRNA-dihydrouridine(20) synthase [NAD(P)+]-like.
   
  
 0.704
TRMT6
TRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X1.
   
  
 0.698
FTSJ1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase.
   
  
 0.681
TRMT12
TRNA wybutosine-synthesizing protein 2 homolog isoform X3.
      
0.674
LCMT2
TRNA wybutosine-synthesizing protein 4 isoform X2.
   
  
 0.672
OSGEP
Probable tRNA N6-adenosine threonylcarbamoyltransferase.
   
  
 0.632
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.