Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SALL1Sal-like protein 1. (1308 aa)    
Predicted Functional Partners:
ENSPMJP00000020337
POU domain, class 5, transcription factor 3-like.
   
 0.789
GATAD2B
GATA zinc finger domain containing 2B.
    
 0.755
LOC107203854
Homeobox protein NANOG-like.
   
 0.698
HOXD12
Homeobox protein HoxC/D12.
    
 
 0.645
SALL4
Sal-like protein 4 isoform X1.
    
  0.638
MBD3
Methyl-CpG-binding domain protein 3 isoform X1.
   
 0.629
MYF6
Myogenic factor 6.
    
 
 0.610
SOX3
Transcription factor SOX1/3/14/21 (SOX group B).
   
 0.595
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.577
RBBP4
Histone-binding protein RBBP4.
    
 0.567
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.