Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHMP4BCharged multivesicular body protein 4b. (227 aa)    
Predicted Functional Partners:
CHMP2B
Charged multivesicular body protein 2B.
   
 0.991
CHMP5
Charged multivesicular body protein 5.
   
0.991
CHMP6
Charged multivesicular body protein 6.
   
 0.990
CHMP7
Charged multivesicular body protein 7 isoform X1.
    
0.986
VPS4B
Vacuolar protein sorting-associated protein 4B.
   
 0.985
VPS4A
Vacuolar protein sorting-associated protein 4A.
   
 0.985
PDCD6IP
Programmed cell death 6-interacting protein isoform X1.
   
 0.983
CHMP1B
Charged multivesicular body protein 1b.
   
 0.973
CHMP1A
Charged multivesicular body protein 1a.
   
 0.973
LOC107202897
Charged multivesicular body protein 3.
   
 0.942
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.