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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A4Solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31. (358 aa)    
Predicted Functional Partners:
VDAC1
Voltage-dependent anion-selective channel protein 1.
   
 0.954
VDAC2
Voltage-dependent anion-selective channel protein 2.
   
 0.954
VDAC3
Voltage-dependent anion-selective channel protein 3 isoform X1.
   
 0.954
PPID
Peptidyl-prolyl cis-trans isomerase D.
   
 0.927
SLC25A6
Solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31.
  
  
 
0.900
SLC25A5
Solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31.
  
  
 
0.900
PPIF
Peptidyl-prolyl cis-trans isomerase F, mitochondrial.
   
 0.892
TIMM22
Mitochondrial import inner membrane translocase subunit Tim22 isoform X1.
    
 0.666
CS
Citrate synthase, mitochondrial.
   
 0.654
ATP5F1A
F-type H+-transporting ATPase subunit alpha.
   
 0.641
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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