STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDA1DET1 and DDB1 associated 1. (89 aa)    
Predicted Functional Partners:
DDB1
DNA damage-binding protein 1.
    
 0.995
CUL4B
Cullin-4B.
    
 0.871
CUL4A
Cullin-4A isoform X1.
    
 0.871
DCAF17
DDB1- and CUL4-associated factor 17 isoform X1.
    
 0.778
DET1
De-etiolated-1.
    
 
 0.770
RBM39
RNA-binding protein 39 isoform X1.
    
 
 0.755
DCAF6
DDB1- and CUL4-associated factor 6 isoform X1.
    
 0.726
DDB2
DNA damage-binding protein 2 isoform X1.
    
 0.711
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.696
DCAF1
DDB1- and CUL4-associated factor 1.
    
 
 0.694
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.