Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4739S ribosomal protein L47, mitochondrial isoform X1. (244 aa)    
Predicted Functional Partners:
MRPL17
39S ribosomal protein L17, mitochondrial.
   
 0.994
MRPL42
39S ribosomal protein L42, mitochondrial.
   
 0.983
MRPL19
39S ribosomal protein L19, mitochondrial.
   
 0.983
MRPL41
39S ribosomal protein L41, mitochondrial.
   
 0.983
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 0.980
MRPL2
Mitochondrial ribosomal protein L2.
   
 0.979
MRPL30
39S ribosomal protein L30, mitochondrial.
   
 
 0.979
MRPL1
39S ribosomal protein L1, mitochondrial isoform X1.
   
 
 0.977
LOC107216391
39S ribosomal protein L50, mitochondrial.
   
 0.977
MRPL21
39S ribosomal protein L21, mitochondrial.
   
 0.974
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.