Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYO5BUnconventional myosin-Vb isoform X1. (1825 aa)    
Predicted Functional Partners:
MYO5A
Unconventional myosin-Va isoform X1.
  
  
 
0.901
MYO5C
Unconventional myosin-Vc.
  
  
 
0.901
RAB11FIP2
Rab11 family-interacting protein 1/2/5.
   
 0.825
RAB27A
Ras-related protein Rab-27A.
    
 0.757
LOC107214511
Ras-related protein Rab-11A-like.
   
 0.744
RAB11B
Ras-related protein Rab-11B.
   
 0.744
RAB11A
Ras-related protein Rab-11A isoform X1.
   
 0.744
RAB11FIP1
Rab11 family-interacting protein 1 isoform X1.
   
 0.739
EXOC4
Exocyst complex component 4.
   
 0.738
MYRIP
Myosin VIIA and Rab interacting protein.
     
 0.618
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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