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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107215210Ras-related protein Rab-18-B-like isoform X1. (205 aa)    
Predicted Functional Partners:
RAB3GAP1
Rab3 GTPase-activating protein catalytic subunit isoform X1.
    
 0.773
RAB3GAP2
Rab3 GTPase-activating protein non-catalytic subunit isoform X1.
     
 0.767
GDI2
Rab GDP dissociation inhibitor beta.
   
 0.705
CHM
Rab proteins geranylgeranyltransferase component A 1 isoform X1.
     
 0.645
ACTR10
Actin-related protein 10.
   
 
 0.593
DCTN6
Dynactin subunit 6 isoform X1.
     
 0.583
ACTR1A
Alpha-centractin.
     
 0.579
DCTN4
Dynactin subunit 4 isoform X1.
   
 
  0.579
LOC107214961
Geranylgeranyl transferase type-2 subunit beta isoform X1.
     
 0.573
ENSPMJP00000017852
annotation not available
     
 0.573
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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