Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TIMM9Mitochondrial import inner membrane translocase subunit TIM9. (89 aa)    
Predicted Functional Partners:
TIMM10
Mitochondrial import inner membrane translocase subunit TIM10.
   
 0.999
TIMM10B
Mitochondrial import inner membrane translocase subunit Tim10 B.
   
 0.991
TIMM8A
Mitochondrial import inner membrane translocase subunit Tim8 A.
   
 0.983
TIMM13
Mitochondrial import inner membrane translocase subunit TIM13.
   
 0.966
TIMM22
Mitochondrial import inner membrane translocase subunit Tim22 isoform X1.
   
 0.960
CHCHD4
Mitochondrial intermembrane space import and assembly protein 40.
   
 0.932
LOC107206655
Mitochondrial import inner membrane translocase subunit TIM23.
   
 0.908
TIMM29
Uncharacterized protein C19orf52-like.
   
 
 0.887
MRPL49
39S ribosomal protein L49, mitochondrial.
   
  
 0.837
YME1L1
ATP-dependent zinc metalloprotease YME1L1 isoform X1.
   
 0.815
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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