TIMM9 protein (Parus major) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TIMM9

Mitochondrial import inner membrane translocase subunit TIM9. (89 aa)

Predicted Functional Partners:

TIMM10

0.999

TIMM22

0.994

TIMM10B

0.967

LOC107206655

0.896

CHCHD4

0.891

TIMM29

0.882

TIMM17A

0.878

TIMM13

0.875

AGK

0.873

TIMM8A

0.870

Your Current Organism:

Parus major

NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGK	TIMM10	ENSPMJP00000011688	ENSPMJP00000007935	Acylglycerol kinase, mitochondrial.	Mitochondrial import inner membrane translocase subunit TIM10.	0.844
AGK	TIMM10B	ENSPMJP00000011688	ENSPMJP00000006789	Acylglycerol kinase, mitochondrial.	Mitochondrial import inner membrane translocase subunit Tim10 B.	0.888
AGK	TIMM22	ENSPMJP00000011688	ENSPMJP00000026992	Acylglycerol kinase, mitochondrial.	Mitochondrial import inner membrane translocase subunit Tim22 isoform X1.	0.703
AGK	TIMM29	ENSPMJP00000011688	ENSPMJP00000002257	Acylglycerol kinase, mitochondrial.	Uncharacterized protein C19orf52-like.	0.898
AGK	TIMM9	ENSPMJP00000011688	ENSPMJP00000003030	Acylglycerol kinase, mitochondrial.	Mitochondrial import inner membrane translocase subunit TIM9.	0.873
CHCHD4	LOC107206655	ENSPMJP00000017022	ENSPMJP00000020798	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import inner membrane translocase subunit TIM23.	0.483
CHCHD4	TIMM10	ENSPMJP00000017022	ENSPMJP00000007935	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import inner membrane translocase subunit TIM10.	0.871
CHCHD4	TIMM10B	ENSPMJP00000017022	ENSPMJP00000006789	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import inner membrane translocase subunit Tim10 B.	0.672
CHCHD4	TIMM13	ENSPMJP00000017022	ENSPMJP00000005090	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import inner membrane translocase subunit TIM13.	0.865
CHCHD4	TIMM17A	ENSPMJP00000017022	ENSPMJP00000005278	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import inner membrane translocase subunit Tim17-A.	0.647
CHCHD4	TIMM22	ENSPMJP00000017022	ENSPMJP00000026992	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import inner membrane translocase subunit Tim22 isoform X1.	0.584
CHCHD4	TIMM8A	ENSPMJP00000017022	ENSPMJP00000016061	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import inner membrane translocase subunit Tim8 A.	0.805
CHCHD4	TIMM9	ENSPMJP00000017022	ENSPMJP00000003030	Mitochondrial intermembrane space import and assembly protein 40.	Mitochondrial import inner membrane translocase subunit TIM9.	0.891
LOC107206655	CHCHD4	ENSPMJP00000020798	ENSPMJP00000017022	Mitochondrial import inner membrane translocase subunit TIM23.	Mitochondrial intermembrane space import and assembly protein 40.	0.483
LOC107206655	TIMM10	ENSPMJP00000020798	ENSPMJP00000007935	Mitochondrial import inner membrane translocase subunit TIM23.	Mitochondrial import inner membrane translocase subunit TIM10.	0.895
LOC107206655	TIMM10B	ENSPMJP00000020798	ENSPMJP00000006789	Mitochondrial import inner membrane translocase subunit TIM23.	Mitochondrial import inner membrane translocase subunit Tim10 B.	0.779
LOC107206655	TIMM13	ENSPMJP00000020798	ENSPMJP00000005090	Mitochondrial import inner membrane translocase subunit TIM23.	Mitochondrial import inner membrane translocase subunit TIM13.	0.879
LOC107206655	TIMM17A	ENSPMJP00000020798	ENSPMJP00000005278	Mitochondrial import inner membrane translocase subunit TIM23.	Mitochondrial import inner membrane translocase subunit Tim17-A.	0.996
LOC107206655	TIMM22	ENSPMJP00000020798	ENSPMJP00000026992	Mitochondrial import inner membrane translocase subunit TIM23.	Mitochondrial import inner membrane translocase subunit Tim22 isoform X1.	0.911
LOC107206655	TIMM8A	ENSPMJP00000020798	ENSPMJP00000016061	Mitochondrial import inner membrane translocase subunit TIM23.	Mitochondrial import inner membrane translocase subunit Tim8 A.	0.822