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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LACTBL1Lactamase beta like 1. (499 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin-dependent serine protein kinase.
   
 0.582
CHST7
Carbohydrate sulfotransferase 7.
     
 0.456
WDR43
U3 small nucleolar RNA-associated protein 5.
   
 0.426
RPS6
Small subunit ribosomal protein S6e.
   
  0.411
EMG1
RRNA small subunit pseudouridine methyltransferase Nep1.
   
  0.408
UTP11
Probable U3 small nucleolar RNA-associated protein 11.
    
  0.407
DCAF13
DDB1- and CUL4-associated factor 13.
    
  0.407
RPS7
Small subunit ribosomal protein S7e.
    
 0.407
NOC4L
Nucleolar complex protein 4 homolog isoform X1.
    
  0.407
FCF1
U3 small nucleolar RNA-associated protein 24.
    
  0.407
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.