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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYP4V2Docosahexaenoic acid omega-hydroxylase. (527 aa)    
Predicted Functional Partners:
POR
NADPH--cytochrome P450 reductase.
 
  
 
 0.772
DIP2C
Disco-interacting protein 2 homolog C isoform X1.
   
 0.666
AASDH
Acyl-CoA synthetase family member 4 isoform X1.
  
 0.606
LSS
Lanosterol synthase.
   
 0.603
SQLE
Squalene monooxygenase.
  
 0.599
SC5D
Delta7-sterol 5-desaturase.
   
 0.561
WDR37
WD repeat-containing protein 37.
    
 0.555
NDOR1
NADPH dependent diflavin oxidoreductase 1.
 
  
 
 0.525
CYB5RL
NADH-cytochrome b5 reductase-like.
      
 0.522
FBH1
F-box DNA helicase 1.
      
 0.522
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.