Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CYP4V2Docosahexaenoic acid omega-hydroxylase. (527 aa)    
Predicted Functional Partners:
POR
NADPH--cytochrome P450 reductase.
 
 
 
 0.775
DIP2C
Disco-interacting protein 2 homolog C isoform X1.
   
 0.753
CYB5R4
Cytochrome b5 reductase 4 isoform X1.
    
 
 0.719
CYB5RL
NADH-cytochrome b5 reductase-like.
      
 0.687
WDR37
WD repeat-containing protein 37.
    
 0.646
VSTM2L
V-set and transmembrane domain-containing protein 2-like protein isoform X1.
      
 0.637
CYP11A1
Cholesterol side-chain cleavage enzyme, mitochondrial.
  
 
 
0.628
CYB5B
Cytochrome b5.
   
 
 0.590
CYB5A
Cytochrome b5 isoform X1.
   
 
 0.590
LSS
Lanosterol synthase.
  
 0.566
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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