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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C3General transcription factor 3C polypeptide 3 (transcription factor C subunit 4). (910 aa)    
Predicted Functional Partners:
GTF3C5
General transcription factor 3C polypeptide 5 (transcription factor C subunit 1).
   
 0.998
BRF1
Transcription factor IIIB 90 kDa subunit isoform X1.
    
 0.995
POLR3D
DNA-directed RNA polymerase III subunit RPC4 isoform X1.
    
 0.982
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
   0.969
ENSPMJP00000004843
annotation not available
   
 0.961
CLP1
Polyribonucleotide 5'-hydroxyl-kinase Clp1.
    
 
 0.923
GTF3C4
General transcription factor 3C polypeptide 4.
   
 0.921
CPSF3
LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3.
   
   0.918
GTF3C2
General transcription factor IIIC subunit 2.
    
 0.917
LOC107199638
Transcription factor IIIB 50 kDa subunit-like.
    
 0.891
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.